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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889739.1_cds_XP_016444413.1_39477
CDS Infomation

[gene=LOC107769691] [db_xref=GeneID:107769691] [protein=malonate--CoA ligase-like] [protein_id=XP_016444413.1] [location=join(6487..6649,8155..8324,8600..8773,9065..9248,9362..9450,9925..9994,10134..10186,10294..10401,10647..10745,10939..11031,11127..11204,11350..11454,11632..11722,15428..15501,15642..15821,15988..16041,16171..16224)] [gbkey=CDS]
Sequence

ATGAGCTCATTGAAGTTACTCAACTACTTTCTCAGTTATAAGTCCACACCTCTTCACTCT
CGCTACAGTCCCTTGTTCAATTTCCCATATATTCAGTCCTATTGTTTTTCATGTCCAAAA
AATCATAGCTTTATCTCCTCCCAATTTCGCCTCTTCTCATCCGCTACAAGTAGTATTAGC
TATATGGAGCTGGTCAAGGAAGTTGCGAGCAAGGGACCTGAATCACAACAGAATATTGCC
ATAAGAGCTGATGAAAAGAGCTACAGTTACATGCAGTTGATATCATCTGCGAGGAGGATT
TCAAATTTATTAAGCAAGCTAGATCTTAAAACGGACAAAGGCATCAAAGAAAATGAACAT
CTCAATGGAGCAAGAGTAGGGATTGTGGCCAAACCTTCTGCTGAGTTCGTTGCTGGAATA
ATAGGGACCTGGCTTAGTGGAGGTTGTGCAGTCCCTCTTGCTCTGAGCTACCCTGAGACT
GAGCTACTACATGTGATGAATGACTCGGGCATCTCCATGATTTTGAGTACTGAAGACCAC
CAAGAACTTATGAATACAATTGCAGCAAAAACTGGTGCTCAGTTATTTCTTATTCCTTCA
ATTCCCGACGTGCATTCATCAACGGAGCATGACCAGTCAAAAGATGTGGTTTCTGATGGT
CAACAAAATCTGCTAGAAATCAATTCCTACGGCGAGAACCCTGCTTTTATCTTGTACACC
AGTGGTACAACAGGGAAACCAAAAGGAGTTGTCCACACGCACAATGGAGTCTTAGCACAG
GTCCAAATGTTAGCTAGCGCATGGGAATACACGTCCAAGGATCAATTTCTGCACTGTCTA
CCACTCCATCATGTGCATGGACTTTTCAATGCTTTACTGGCCCCTCTTTATGCAGGCTCC
ACGGTCGACTTCGTGCCAAAGTTCAGTGTGAGGGGAATTTGGCAGAAATGGCGTGAATCG
TATCCTACAGATGGGACTAAAGTGGATAATGCCATAACGGTGTTTACCGGAGTTCCAACT
ATGTATGCGCGATTGATACAAGGTTATGAAGCAATGGATCCAGAACTGAAAGCAGCTTCT
GCTTCAGCAGCAAGGCACTTGCGTCTTATGATGAGTGGCTCCTCTGCACTTCCTCTGCCC
GTCATGCAGCAGTGGGAAACCATTACCGGACATCGCTTATTAGAACGTTATGGCATGACT
GAGTTTGTGATGGCAATCTCTAATCCCATAAGAGGCAAGCGCAAAGGAGGTACTGTTGGC
AAGCCATTTCCGGGTGTACAGGCCAAAATTCTTTTGGAAGATGAGAGCAGTAACGATAAA
ACTGGAGTTGGGGAGCTTTGCATTAAAAGCCCATCATTGTTCAAAGAATACTGGAAACTA
CCTGAGGTATCCAAGCAGTCATTTACTGAGGATGGATATTTCAAGACTGGAGATACTGTT
ACAGTTGATGAAGAGGGATATTACATCATTTTGGGACGTACCAATGCTGATATTATGAAG
GTTGGTGGATACAAATTATCAGCATTGGAAATTGAAGCAGTTCTGTTGGAGCATCCAACT
ATATCAGAATGCTGTGTGTTAGGCTTGCCTGACAAAGACTATGGCGAAGTGGTATGTACA
ATAGTTGTGCCTGAGGGCGAAGTGAAAAGAAGACGAGACGAGCAGCTAAAGCCTGCACTA
ACCTTGCAAGAACTTTCTGATTGGGCGAAGGAGAAACTTGCCCCTTACAAGATACCAACT
CGTCTGTTTCTTTGGGACTCGTTGCCTCGAAATGCTATGGGAAAGGTAAATAAGAAAGAG
CTGAAAAGAAACCTGGCTGAAGATCCCAAACAGGTTTAA

Peptide Sequence

PEP ID

XP_016444413.1
PEP Infomation

PREDICTED: malonate--CoA ligase-like [Nicotiana tabacum]
Sequence

MSSLKLLNYFLSYKSTPLHSRYSPLFNFPYIQSYCFSCPKNHSFISSQFRLFSSATSSIS
YMELVKEVASKGPESQQNIAIRADEKSYSYMQLISSARRISNLLSKLDLKTDKGIKENEH
LNGARVGIVAKPSAEFVAGIIGTWLSGGCAVPLALSYPETELLHVMNDSGISMILSTEDH
QELMNTIAAKTGAQLFLIPSIPDVHSSTEHDQSKDVVSDGQQNLLEINSYGENPAFILYT
SGTTGKPKGVVHTHNGVLAQVQMLASAWEYTSKDQFLHCLPLHHVHGLFNALLAPLYAGS
TVDFVPKFSVRGIWQKWRESYPTDGTKVDNAITVFTGVPTMYARLIQGYEAMDPELKAAS
ASAARHLRLMMSGSSALPLPVMQQWETITGHRLLERYGMTEFVMAISNPIRGKRKGGTVG
KPFPGVQAKILLEDESSNDKTGVGELCIKSPSLFKEYWKLPEVSKQSFTEDGYFKTGDTV
TVDEEGYYIILGRTNADIMKVGGYKLSALEIEAVLLEHPTISECCVLGLPDKDYGEVVCT
IVVPEGEVKRRRDEQLKPALTLQELSDWAKEKLAPYKIPTRLFLWDSLPRNAMGKVNKKE
LKRNLAEDPKQV

Transcript Sequence

Gene sequence data has not been registered.